Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839969.1_cds_XP_016507457.1_20576
CDS Infomation

[gene=LOC107825141] [db_xref=GeneID:107825141] [protein=histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like] [protein_id=XP_016507457.1] [location=80503..83757] [gbkey=CDS]
Sequence

ATGGCGTCAGTGTCAAATGATGGGTTATCCAATGAGAGCGTGAAGAAGCGGCTGTCAGAA
AATGGTTACCACTCGTATTTGGGCATTATACCAAAATATAAAGTTCGGAAAGTCTCAGCA
GTACGAGATTTTCCTCCAGGATGTGGTAATATCTCTCCAAAAGTTGATTTGAATCATGAA
CAAGATGCCGTTGTGTCCACTAATGAAGATATGGCTAACATTGTGTTGGTTGATGTTGTT
AAAGATTCTAACAGTGAGATCGAATCACGGTCAGTTGAAGCTGTGGACTGTCTAGTTAAC
ATGGAGGAGCATGAAAAGTTGGATAGGTTAATAGGGGAAGTGGTATCGAAAAACATGGGT
GCAATAGCAAATGAGTTGGGAGAAAAAATAAGTGACGACAAATCTCTTGGATTTGAGTTG
CCTAAAGATCTTGAAATTAGTGAAATGGAGCTTTCCAAGGAAACGGAAGACATCCAGACT
GACACTTTAGTGAAGGGAGTTAATGAAGAGAGAAGTTTACCTTTGGTCGAAAATGTTTGT
GGTGGACACAAGACATCTGTGCGGGAAATTGGCGGTGCCACTGATGAACCAAGTCCTGTT
AGTCAAGTCAAAGTGGTTTTGCCACCTCAGCAGCTAATTAGTGTTATGGAAAATGCTTCC
CCCCCGCCAAAGAATAAGTACCGCAAAAGAAGAGTATCTGCTGTTCGTGACTTCCCTCCA
TTTTGTGGAACAAATGTTCCTAAGCCAACTGAACAGAATTTCTATGGTGTTACTGAAGAA
AGCAAGGATGTGGCTGGGTTCAATAAGGCAGTTATAAATAATGAAGTGATTGAGACACTG
AGAGATGTTACGGACACTGGGGCATTGCAAGAGAGGTTGGTTGAAAGTGAGGAGGCTGAT
TCTCTGAGAGAGAGGGACATTGCTAGTCCCAAAGATAGGGTGTTGGAGCAAATAACAATG
GTTCACAGTGAAGAACAGGAAGGTATCCAAAATGATTTTGATGGAAGAAGTCAGATGGAA
AGAACTGTGGTTATGCCCGAGACAATGACGAAAAAGGAGAATGATGCAGGAGTTGTGGGA
AAGGAGATTGTTGTACATTCAGAGGATGAAAGTGAAAAGACAACTAGTGCAACTAGTGCT
CTTGGTTGTGGAAATGAAATGGTTGGGCCGATTACGCAGGGTGCTGAGACGTATTGTGCA
TGGGAGCAAAGGAAAAAAAAGAGTTTAGATGGCCCTGTGAGTGGAAATGAAATTGTTGTC
TCACAGGTCAAAGACAATCTGACAAAGACTGCAGTCAGTGCTTGTGGTTCTGGGCATGAA
ATAGTTAAGCCAATTGTGCAAGGTCTGATGGCCGAGCCACACTGTCCATGGAGGCAGGGA
AAGCAAACTAGTGTAGATTGTGCGGTGAGTGGAAACCAAGATGAGAAGTCTCCTCTGTCT
TGGCGCAAGAAGGCTAAAGCTGTCGCCAGAAAAAGTAATCCTAGGGGTAAGAAAAAATCA
GCTTCTGGTGGCGAAGCTACCAATGAATTTTCAAGGGCACTAGTTGTGTTCGATGACGAA
GGATCTGCTTTACATGCTGTCAGCAACGATGGAGCTCACAGTTTGAATAGGGAAGCACTA
CATGAAGATCGTCCCGTTGGACAAGGACGACGTGAATTTGACGTGACCCTACCACCTTTT
GGTCCAAACAGTTCTAGTCATGGTGATGCCCGAACTAAAGTTAGAGAGACTCTTCGTATG
TTTCAGGCTATCTGTAGAAAGCTCTTGCAAGAAGAAGAGTCAAAGTCAAGACCTGAAGAA
GCAAAACCGAGGCAAGGGTCAAACAGAATTGATCTTCAAGCGGCAAAAATCATCAAGGCA
AAAGGAAAAGAAGTTAACACAGGTCAGCACATACTGGGAGAAGTTCCTGGAGTTGAAGTT
GGAGATGAGTTCCAATACAGGGTGGAACTTGCTATTGTGGGGGTTCATCGCCTATATCAG
GCTGGTATAGATTACATGAAGCAGGGAGGTATGCTGATCGCGATTAGTATTGTTTCTTCA
GGGGTCTATGATGATGCTGTGGAAGATGCTGATGTATTGATTTATTCTGGGCAAGGCGGA
AATGTGGTAGGTAAGGTCAAAACTCCTGAAGATCAGAAGCTTGAAAGAGGTAATTTAGCT
TTGAAGAATAGTATATCAGTTCAGAATCCTGTTCGGGTGATTCGTGGATCCAAGGAGACG
AAAACGTCTGAATCTGTGGATGGTAAAGGTAAGGTAGTGACAACATATATTTATGATGGG
TTGTACAAGGTTGATAATTTTTGGACAGAACAAGGGCCAAAGGGTAAGATGGTTTTTATG
TTTAAGTTGGTGAGAATTCCTGGTCAACCAGAGCTTGCTTGGAAAGAAGTGAAGTCATCA
AAAAAGTCCAAAGTGCGGCATGGTGTTTGTGTCCATGACATTACAGAAGGAAAGGATACA
CTCCCGATAAGTGCTGTGAACACAATTGATGGTGAGAAACCTCCACCATTCACTTATATC
AAGAAGATGATATATCCTGACTGGTTCCAGCGATCTCCTCCTAAAGGTTGTGATTGTATC
GGTAGATGTTCTGATTCCAAGAGGTGCTCATGTGCAGTTAAAAATGGAGGCGAGATCCCA
TACAACCGTAATGGAGCTATTGTTGAAGTGAAGCCTCTTGTCTATGAATGTGGTCCTTCT
TGTAAATGTCCCCCCTCTTGCTACAATAGAGTCGGCCAACACGGTATTAAAATTCCACTT
GAGATCTTTAAGACAAATTCAAGGGGATGGGGTGTGAGAGCTTTAACATCTATTCCTTCA
GGAACCTTTATCTGTGAGTATGCAGGAGAGCTTCTTGAAGACAAGGAAGCTGAACGAAGA
ATTGGTAGTGACGAATACCTTTTTGATATTGGGCAGAACTATAGCGATTGTTCTGTGAAC
TCTTCCACACAAGCAGAATTAAGTGAGGTAGTAGAAGAGGGTGGTTATACAATTGATGCA
GCTCAGTGTGGAAATGTCGGGCGATTTATCAATCACAGTTGTTCACCTAACTTGTATGCA
CAAAACGTTCTTTATGATCACGAAGATAAGAAAATGCCTCATATCATGTTCTTTGCAGCA
GATAACATTCCTCCTTTGGCGGAGCTGAGTTACCATTATAATTATTCCGTGGATCAGGTA
CGTGACTCCAATGGCAATATCAAGGTGAAGAAATGCTATTGTGGATCTTCAGAGTGTAGC
GGTCGGATGTACTAG

Peptide Sequence

PEP ID

XP_016507457.1
PEP Infomation

PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like [Nicotiana tabacum]
Sequence

MASVSNDGLSNESVKKRLSENGYHSYLGIIPKYKVRKVSAVRDFPPGCGNISPKVDLNHE
QDAVVSTNEDMANIVLVDVVKDSNSEIESRSVEAVDCLVNMEEHEKLDRLIGEVVSKNMG
AIANELGEKISDDKSLGFELPKDLEISEMELSKETEDIQTDTLVKGVNEERSLPLVENVC
GGHKTSVREIGGATDEPSPVSQVKVVLPPQQLISVMENASPPPKNKYRKRRVSAVRDFPP
FCGTNVPKPTEQNFYGVTEESKDVAGFNKAVINNEVIETLRDVTDTGALQERLVESEEAD
SLRERDIASPKDRVLEQITMVHSEEQEGIQNDFDGRSQMERTVVMPETMTKKENDAGVVG
KEIVVHSEDESEKTTSATSALGCGNEMVGPITQGAETYCAWEQRKKKSLDGPVSGNEIVV
SQVKDNLTKTAVSACGSGHEIVKPIVQGLMAEPHCPWRQGKQTSVDCAVSGNQDEKSPLS
WRKKAKAVARKSNPRGKKKSASGGEATNEFSRALVVFDDEGSALHAVSNDGAHSLNREAL
HEDRPVGQGRREFDVTLPPFGPNSSSHGDARTKVRETLRMFQAICRKLLQEEESKSRPEE
AKPRQGSNRIDLQAAKIIKAKGKEVNTGQHILGEVPGVEVGDEFQYRVELAIVGVHRLYQ
AGIDYMKQGGMLIAISIVSSGVYDDAVEDADVLIYSGQGGNVVGKVKTPEDQKLERGNLA
LKNSISVQNPVRVIRGSKETKTSESVDGKGKVVTTYIYDGLYKVDNFWTEQGPKGKMVFM
FKLVRIPGQPELAWKEVKSSKKSKVRHGVCVHDITEGKDTLPISAVNTIDGEKPPPFTYI
KKMIYPDWFQRSPPKGCDCIGRCSDSKRCSCAVKNGGEIPYNRNGAIVEVKPLVYECGPS
CKCPPSCYNRVGQHGIKIPLEIFKTNSRGWGVRALTSIPSGTFICEYAGELLEDKEAERR
IGSDEYLFDIGQNYSDCSVNSSTQAELSEVVEEGGYTIDAAQCGNVGRFINHSCSPNLYA
QNVLYDHEDKKMPHIMFFAADNIPPLAELSYHYNYSVDQVRDSNGNIKVKKCYCGSSECS
GRMY

Transcript Sequence

Gene sequence data has not been registered.